|
Data file contents and counts for annotation hierarchy subtasks. |
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| File contents |
Training data count |
Test data count |
| Documents – PMIDs |
504 |
378 |
|
|
||
| Genes – Gene symbol, MGI identifier, and gene name for all used |
1294 |
777 |
| Document gene pairs – PMID-gene pairs |
1418 |
877 |
| Positive examples – PMIDs |
178 |
149 |
| Positive examples – PMID-gene pairs |
346 |
295 |
| Positive examples – PMID-gene-domain tuples |
589 |
495 |
| Positive examples – PMID-gene-domain-evidence tuples |
640 |
522 |
| Positive examples – all PMID-gene-GO-evidence tuples |
872 |
693 |
| Negative examples – PMIDs |
326 |
229 |
| Negative examples – PMID-gene pairs |
1072 |
582 |
Cohen and Hersh Journal of Biomedical Discovery and Collaboration 2006 1:4 doi:10.1186/1747-5333-1-4 |
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